Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm13326-201ENSMUST00000118730 1011 ntBASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm37922-201ENSMUST00000195596 455 ntBASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm18018-201ENSMUST00000198273 408 ntBASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm17794-201ENSMUST00000220252 955 ntBASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Mir339-201ENSMUST00000083659 96 ntBASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Gm10531-201ENSMUST00000193527 2303 ntBASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trav3-3Q5R1C3 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Gm38001-201ENSMUST00000192900 3761 ntBASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Gm43307-201ENSMUST00000199465 2371 ntBASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Gm2824-203ENSMUST00000226189 1228 ntBASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 n-R5s77-201ENSMUST00000083757 119 ntBASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trav3-3Q5R1C3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms