Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gm45500-201ENSMUST00000211676 803 ntBASIC14.43□□□□□ -0.1
Usp48Q3V0C5 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gm6991-201ENSMUST00000218475 1178 ntBASIC14.43□□□□□ -0.1
Usp48Q3V0C5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gm5805-201ENSMUST00000072779 456 ntBASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.43□□□□□ -0.1
Usp48Q3V0C5 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.42□□□□□ -0.1
Usp48Q3V0C5 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp48Q3V0C5 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Gm22711-201ENSMUST00000116890 133 ntBASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Gm12943-201ENSMUST00000119616 210 ntBASIC14.41□□□□□ -0.1
Usp48Q3V0C5 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Mir6407-201ENSMUST00000184510 101 ntBASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms