Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm26083-201ENSMUST00000157904 193 ntBASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm9230-201ENSMUST00000188228 532 ntBASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm37259-201ENSMUST00000193903 849 ntBASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim43aQ3TL54 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Gm4607-201ENSMUST00000206649 577 ntBASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.29□□□□□ -0.44
Trim43aQ3TL54 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Gm18065-201ENSMUST00000221395 526 ntBASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43aQ3TL54 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms