Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.49□□□□□ -0.89
Trim63Q38HM4 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm37048-201ENSMUST00000194827 5578 ntBASIC9.49□□□□□ -0.89
Trim63Q38HM4 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm44492-201ENSMUST00000197012 141 ntBASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 CT025645.2-201ENSMUST00000223278 3827 ntBASIC9.49□□□□□ -0.89
Trim63Q38HM4 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm38005-201ENSMUST00000194845 2745 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Erich3-203ENSMUST00000189969 3460 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm45769-201ENSMUST00000204588 1828 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm15240-201ENSMUST00000118156 720 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm12485-201ENSMUST00000119641 291 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm14140-201ENSMUST00000119999 995 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm18057-201ENSMUST00000208220 503 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.48□□□□□ -0.89
Trim63Q38HM4 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms