Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.66□□□□□ -0.86
Tff1Q08423 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tff1Q08423 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Tff1Q08423 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.65□□□□□ -0.86
Tff1Q08423 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Tff1Q08423 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Tff1Q08423 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm13611-201ENSMUST00000118269 318 ntBASIC9.65□□□□□ -0.86
Tff1Q08423 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.65□□□□□ -0.86
Tff1Q08423 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.65□□□□□ -0.86
Tff1Q08423 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.65□□□□□ -0.86
Tff1Q08423 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm45118-201ENSMUST00000208928 825 ntBASIC9.65□□□□□ -0.86
Tff1Q08423 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.65□□□□□ -0.86
Tff1Q08423 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.65□□□□□ -0.86
Tff1Q08423 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.65□□□□□ -0.86
Tff1Q08423 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.65□□□□□ -0.86
Tff1Q08423 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.65□□□□□ -0.86
Tff1Q08423 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tff1Q08423 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tff1Q08423 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Tff1Q08423 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Tff1Q08423 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tff1Q08423 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Tff1Q08423 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Tff1Q08423 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.64□□□□□ -0.87
Tff1Q08423 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.64□□□□□ -0.87
Tff1Q08423 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.64□□□□□ -0.87
Tff1Q08423 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tff1Q08423 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Tff1Q08423 Gm23200-201ENSMUST00000104379 132 ntBASIC9.64□□□□□ -0.87
Tff1Q08423 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.64□□□□□ -0.87
Tff1Q08423 Gm5419-201ENSMUST00000119301 527 ntBASIC9.64□□□□□ -0.87
Tff1Q08423 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.64□□□□□ -0.87
Tff1Q08423 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.64□□□□□ -0.87
Tff1Q08423 Gm9550-201ENSMUST00000161130 862 ntBASIC9.64□□□□□ -0.87
Tff1Q08423 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms