Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cdx4Q07424 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx4Q07424 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.02□□□□□ -0.97
Cdx4Q07424 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx4Q07424 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx4Q07424 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Cdx4Q07424 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx4Q07424 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx4Q07424 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdx4Q07424 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.01□□□□□ -0.97
Cdx4Q07424 Gm11331-201ENSMUST00000119764 288 ntBASIC9.01□□□□□ -0.97
Cdx4Q07424 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.01□□□□□ -0.97
Cdx4Q07424 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.01□□□□□ -0.97
Cdx4Q07424 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.01□□□□□ -0.97
Cdx4Q07424 Gm37986-201ENSMUST00000193285 383 ntBASIC9.01□□□□□ -0.97
Cdx4Q07424 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Gm43962-201ENSMUST00000203898 190 ntBASIC9.01□□□□□ -0.97
Cdx4Q07424 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cdx4Q07424 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdx4Q07424 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9□□□□□ -0.97
Cdx4Q07424 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Cdx4Q07424 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9□□□□□ -0.97
Cdx4Q07424 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cdx4Q07424 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Cdx4Q07424 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Cdx4Q07424 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9□□□□□ -0.97
Cdx4Q07424 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cdx4Q07424 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cdx4Q07424 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9□□□□□ -0.97
Cdx4Q07424 Gm22133-201ENSMUST00000102082 109 ntBASIC9□□□□□ -0.97
Cdx4Q07424 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Gm14247-201ENSMUST00000120950 237 ntBASIC9□□□□□ -0.97
Cdx4Q07424 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9□□□□□ -0.97
Cdx4Q07424 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9□□□□□ -0.97
Cdx4Q07424 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Mir7677-201ENSMUST00000184226 67 ntBASIC9□□□□□ -0.97
Cdx4Q07424 Gm18038-201ENSMUST00000197900 485 ntBASIC9□□□□□ -0.97
Cdx4Q07424 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9□□□□□ -0.97
Cdx4Q07424 Gm44136-201ENSMUST00000203819 1106 ntBASIC9□□□□□ -0.97
Cdx4Q07424 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9□□□□□ -0.97
Cdx4Q07424 Gm17827-201ENSMUST00000211825 742 ntBASIC9□□□□□ -0.97
Cdx4Q07424 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9□□□□□ -0.97
Cdx4Q07424 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Cdx4Q07424 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9□□□□□ -0.97
Cdx4Q07424 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cdx4Q07424 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms