Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Emx1Q04742 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Emx1Q04742 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.84□□□□□ -0.67
Emx1Q04742 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Emx1Q04742 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Emx1Q04742 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.83□□□□□ -0.68
Emx1Q04742 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.83□□□□□ -0.68
Emx1Q04742 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Gm14028-201ENSMUST00000117434 479 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Gm14109-201ENSMUST00000118814 309 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.83□□□□□ -0.68
Emx1Q04742 Gm22902-201ENSMUST00000158488 302 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Gm26361-201ENSMUST00000158868 186 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Emx1Q04742 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Emx1Q04742 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Gm8018-201ENSMUST00000173536 789 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Gm27341-201ENSMUST00000183570 106 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Gm37986-201ENSMUST00000193285 383 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.83□□□□□ -0.68
Emx1Q04742 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.83□□□□□ -0.68
Emx1Q04742 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Emx1Q04742 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Emx1Q04742 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Emx1Q04742 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Emx1Q04742 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Emx1Q04742 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Emx1Q04742 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Emx1Q04742 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Emx1Q04742 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Gm23912-201ENSMUST00000104687 87 ntBASIC10.82□□□□□ -0.68
Emx1Q04742 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Emx1Q04742 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Emx1Q04742 Gm12314-201ENSMUST00000118104 538 ntBASIC10.82□□□□□ -0.68
Emx1Q04742 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.82□□□□□ -0.68
Emx1Q04742 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Emx1Q04742 Mir5120-201ENSMUST00000175020 78 ntBASIC10.82□□□□□ -0.68
Emx1Q04742 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Emx1Q04742 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Emx1Q04742 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Emx1Q04742 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms