Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm5455-201ENSMUST00000058710 715 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
VcpQ01853 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.44□□□□□ -0.42
VcpQ01853 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.44□□□□□ -0.42
VcpQ01853 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.44□□□□□ -0.42
VcpQ01853 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VcpQ01853 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VcpQ01853 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.43□□□□□ -0.42
VcpQ01853 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.43□□□□□ -0.42
VcpQ01853 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.43□□□□□ -0.42
VcpQ01853 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
VcpQ01853 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VcpQ01853 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VcpQ01853 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
VcpQ01853 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Gm14585-201ENSMUST00000120713 634 ntBASIC12.43□□□□□ -0.42
VcpQ01853 Gm12516-201ENSMUST00000120819 385 ntBASIC12.43□□□□□ -0.42
VcpQ01853 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.43□□□□□ -0.42
VcpQ01853 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
VcpQ01853 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Gm27530-201ENSMUST00000184096 98 ntBASIC12.43□□□□□ -0.42
VcpQ01853 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.43□□□□□ -0.42
VcpQ01853 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Gm9111-201ENSMUST00000219394 709 ntBASIC12.43□□□□□ -0.42
VcpQ01853 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.43□□□□□ -0.42
VcpQ01853 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
VcpQ01853 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
VcpQ01853 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
VcpQ01853 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VcpQ01853 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VcpQ01853 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
VcpQ01853 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VcpQ01853 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.42□□□□□ -0.42
VcpQ01853 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.42□□□□□ -0.42
VcpQ01853 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
VcpQ01853 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.42□□□□□ -0.42
VcpQ01853 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Gm24891-201ENSMUST00000104391 136 ntBASIC12.42□□□□□ -0.42
VcpQ01853 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Gm1848-201ENSMUST00000120711 789 ntBASIC12.42□□□□□ -0.42
VcpQ01853 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Gm5706-201ENSMUST00000181525 993 ntBASIC12.42□□□□□ -0.42
VcpQ01853 Gm43610-201ENSMUST00000199117 365 ntBASIC12.42□□□□□ -0.42
VcpQ01853 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Gm17831-201ENSMUST00000205579 900 ntBASIC12.42□□□□□ -0.42
VcpQ01853 Gm17931-201ENSMUST00000208132 634 ntBASIC12.42□□□□□ -0.42
VcpQ01853 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.42□□□□□ -0.42
VcpQ01853 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.42□□□□□ -0.42
VcpQ01853 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.42□□□□□ -0.42
VcpQ01853 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.42□□□□□ -0.42
VcpQ01853 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VcpQ01853 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms