Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm14193-201ENSMUST00000105067 153 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm22711-201ENSMUST00000116890 133 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm8737-201ENSMUST00000122208 642 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm10051-201ENSMUST00000145209 414 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.01□□□□□ -0.65
Nkx3-2P97503 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx3-2P97503 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11□□□□□ -0.65
Nkx3-2P97503 Gm37580-201ENSMUST00000192408 2800 ntBASIC11□□□□□ -0.65
Nkx3-2P97503 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms