Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Npas1P97459 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Npas1P97459 Gm16177-201ENSMUST00000120728 718 ntBASIC9.74□□□□□ -0.85
Npas1P97459 Gm13342-201ENSMUST00000121055 207 ntBASIC9.74□□□□□ -0.85
Npas1P97459 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.74□□□□□ -0.85
Npas1P97459 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.74□□□□□ -0.85
Npas1P97459 Gm5904-201ENSMUST00000210286 865 ntBASIC9.74□□□□□ -0.85
Npas1P97459 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.74□□□□□ -0.85
Npas1P97459 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Npas1P97459 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC9.74□□□□□ -0.85
Npas1P97459 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.74□□□□□ -0.85
Npas1P97459 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Npas1P97459 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.73□□□□□ -0.85
Npas1P97459 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.73□□□□□ -0.85
Npas1P97459 Gm12036-201ENSMUST00000120008 530 ntBASIC9.73□□□□□ -0.85
Npas1P97459 Gm11591-201ENSMUST00000120063 702 ntBASIC9.73□□□□□ -0.85
Npas1P97459 Gm1335-201ENSMUST00000121653 386 ntBASIC9.73□□□□□ -0.85
Npas1P97459 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.73□□□□□ -0.85
Npas1P97459 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.73□□□□□ -0.85
Npas1P97459 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Npas1P97459 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.73□□□□□ -0.85
Npas1P97459 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Npas1P97459 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
Npas1P97459 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Npas1P97459 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Npas1P97459 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms