Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.82□□□□□ -0.68
SgcdP82347 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Gm9083-201ENSMUST00000120423 819 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcdP82347 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcdP82347 Gm22902-201ENSMUST00000158488 302 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Gm23119-201ENSMUST00000158610 140 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcdP82347 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcdP82347 Gm4768-201ENSMUST00000206199 686 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Gm21769-201ENSMUST00000211922 111 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcdP82347 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 Gm19163-201ENSMUST00000223313 780 ntBASIC10.81□□□□□ -0.68
SgcdP82347 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcdP82347 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.81□□□□□ -0.68
SgcdP82347 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcdP82347 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
SgcdP82347 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcdP82347 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.8□□□□□ -0.68
SgcdP82347 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SgcdP82347 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SgcdP82347 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
SgcdP82347 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SgcdP82347 Gm11597-201ENSMUST00000121423 964 ntBASIC10.8□□□□□ -0.68
SgcdP82347 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.8□□□□□ -0.68
SgcdP82347 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.8□□□□□ -0.68
SgcdP82347 Gm16505-201ENSMUST00000179981 232 ntBASIC10.8□□□□□ -0.68
SgcdP82347 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SgcdP82347 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcdP82347 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.8□□□□□ -0.68
SgcdP82347 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.8□□□□□ -0.68
SgcdP82347 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcdP82347 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
SgcdP82347 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcdP82347 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
SgcdP82347 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms