Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pdlim4P70271 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pdlim4P70271 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pdlim4P70271 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pdlim4P70271 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.7□□□□□ -0.86
Pdlim4P70271 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.7□□□□□ -0.86
Pdlim4P70271 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pdlim4P70271 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Pdlim4P70271 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.7□□□□□ -0.86
Pdlim4P70271 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.7□□□□□ -0.86
Pdlim4P70271 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pdlim4P70271 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pdlim4P70271 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pdlim4P70271 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pdlim4P70271 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.7□□□□□ -0.86
Pdlim4P70271 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm11509-201ENSMUST00000117358 325 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm12857-201ENSMUST00000117678 592 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm7857-201ENSMUST00000117957 358 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm12217-201ENSMUST00000118858 696 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm12501-201ENSMUST00000119163 529 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm16505-201ENSMUST00000179981 232 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm9136-201ENSMUST00000193368 454 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.69□□□□□ -0.86
Pdlim4P70271 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.69□□□□□ -0.86
Pdlim4P70271 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pdlim4P70271 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.68□□□□□ -0.86
Pdlim4P70271 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.68□□□□□ -0.86
Pdlim4P70271 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.68□□□□□ -0.86
Pdlim4P70271 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Gm11663-201ENSMUST00000117888 290 ntBASIC9.68□□□□□ -0.86
Pdlim4P70271 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms