Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nup43P59235 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.97□□□□□ -0.65
Nup43P59235 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.97□□□□□ -0.65
Nup43P59235 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.97□□□□□ -0.65
Nup43P59235 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.97□□□□□ -0.65
Nup43P59235 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nup43P59235 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nup43P59235 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nup43P59235 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nup43P59235 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.96□□□□□ -0.65
Nup43P59235 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.96□□□□□ -0.65
Nup43P59235 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.96□□□□□ -0.65
Nup43P59235 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nup43P59235 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.96□□□□□ -0.65
Nup43P59235 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.96□□□□□ -0.65
Nup43P59235 Gm12165-201ENSMUST00000117047 342 ntBASIC10.96□□□□□ -0.65
Nup43P59235 Gm15595-201ENSMUST00000120840 961 ntBASIC10.96□□□□□ -0.65
Nup43P59235 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.96□□□□□ -0.65
Nup43P59235 B9d1os-201ENSMUST00000137010 674 ntBASIC10.96□□□□□ -0.65
Nup43P59235 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.96□□□□□ -0.65
Nup43P59235 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.96□□□□□ -0.65
Nup43P59235 Gm10807-201ENSMUST00000177134 795 ntBASIC10.96□□□□□ -0.65
Nup43P59235 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.96□□□□□ -0.65
Nup43P59235 Gm43002-201ENSMUST00000200310 155 ntBASIC10.96□□□□□ -0.65
Nup43P59235 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.96□□□□□ -0.65
Nup43P59235 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.96□□□□□ -0.65
Nup43P59235 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nup43P59235 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup43P59235 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nup43P59235 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup43P59235 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup43P59235 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nup43P59235 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Nup43P59235 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup43P59235 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup43P59235 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup43P59235 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Nup43P59235 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nup43P59235 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nup43P59235 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup43P59235 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup43P59235 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.95□□□□□ -0.66
Nup43P59235 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms