Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vps33bP59016 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps33bP59016 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Gm25288-201ENSMUST00000122800 265 ntBASIC14.54□□□□□ -0.08
Vps33bP59016 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps33bP59016 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC14.54□□□□□ -0.08
Vps33bP59016 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps33bP59016 Gm42867-201ENSMUST00000202995 469 ntBASIC14.54□□□□□ -0.08
Vps33bP59016 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.54□□□□□ -0.08
Vps33bP59016 Gm9644-201ENSMUST00000212828 1183 ntBASIC14.54□□□□□ -0.08
Vps33bP59016 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps33bP59016 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps33bP59016 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps33bP59016 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vps33bP59016 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps33bP59016 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vps33bP59016 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Matn2-206ENSMUST00000228570 2798 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps33bP59016 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC14.53□□□□□ -0.08
Vps33bP59016 Gm15617-201ENSMUST00000118973 771 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Gm15746-201ENSMUST00000120684 1027 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Gm15982-201ENSMUST00000121681 554 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC14.53□□□□□ -0.08
Vps33bP59016 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC14.53□□□□□ -0.08
Vps33bP59016 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 n-R5s130-201ENSMUST00000178128 119 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Gm24312-201ENSMUST00000178677 119 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 n-R5s106-201ENSMUST00000179060 119 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 n-R5s118-201ENSMUST00000179887 119 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Gm37851-201ENSMUST00000193871 889 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 AC129217.1-201ENSMUST00000225181 642 ntBASIC14.53□□□□□ -0.08
Vps33bP59016 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vps33bP59016 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps33bP59016 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Vps33bP59016 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Vps33bP59016 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Vps33bP59016 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps33bP59016 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Vps33bP59016 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Vps33bP59016 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vps33bP59016 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps33bP59016 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps33bP59016 Gm24294-201ENSMUST00000158295 277 ntBASIC14.52□□□□□ -0.09
Vps33bP59016 Gm4462-201ENSMUST00000166453 492 ntBASIC14.52□□□□□ -0.09
Vps33bP59016 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps33bP59016 Snord55-201ENSMUST00000174939 79 ntBASIC14.52□□□□□ -0.09
Vps33bP59016 Gm8601-201ENSMUST00000182096 909 ntBASIC14.52□□□□□ -0.09
Vps33bP59016 Zcwpw2-203ENSMUST00000187803 372 ntBASIC14.52□□□□□ -0.09
Vps33bP59016 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.52□□□□□ -0.09
Vps33bP59016 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps33bP59016 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.52□□□□□ -0.09
Vps33bP59016 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps33bP59016 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps33bP59016 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps33bP59016 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms