Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lim2P56563 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.6□□□□□ -0.55
Lim2P56563 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lim2P56563 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lim2P56563 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lim2P56563 Gm13611-201ENSMUST00000118269 318 ntBASIC11.6□□□□□ -0.55
Lim2P56563 Gm15595-201ENSMUST00000120840 961 ntBASIC11.6□□□□□ -0.55
Lim2P56563 Gm15566-201ENSMUST00000121130 590 ntBASIC11.6□□□□□ -0.55
Lim2P56563 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.6□□□□□ -0.55
Lim2P56563 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.6□□□□□ -0.55
Lim2P56563 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.6□□□□□ -0.55
Lim2P56563 Gm10774-201ENSMUST00000188689 204 ntBASIC11.6□□□□□ -0.55
Lim2P56563 Gm44100-201ENSMUST00000204329 436 ntBASIC11.6□□□□□ -0.55
Lim2P56563 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lim2P56563 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.6□□□□□ -0.55
Lim2P56563 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lim2P56563 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.59□□□□□ -0.55
Lim2P56563 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.59□□□□□ -0.55
Lim2P56563 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.59□□□□□ -0.55
Lim2P56563 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Gm15432-201ENSMUST00000121106 195 ntBASIC11.59□□□□□ -0.55
Lim2P56563 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.59□□□□□ -0.55
Lim2P56563 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.59□□□□□ -0.55
Lim2P56563 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Lim2P56563 Gm29499-201ENSMUST00000189151 486 ntBASIC11.59□□□□□ -0.55
Lim2P56563 Gm28329-201ENSMUST00000191208 689 ntBASIC11.59□□□□□ -0.55
Lim2P56563 Gm29171-201ENSMUST00000191397 486 ntBASIC11.59□□□□□ -0.55
Lim2P56563 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.59□□□□□ -0.55
Lim2P56563 Gm37835-201ENSMUST00000193305 361 ntBASIC11.59□□□□□ -0.55
Lim2P56563 Gm38151-201ENSMUST00000195085 289 ntBASIC11.59□□□□□ -0.55
Lim2P56563 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.59□□□□□ -0.55
Lim2P56563 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Lim2P56563 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Lim2P56563 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.59□□□□□ -0.55
Lim2P56563 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.59□□□□□ -0.55
Lim2P56563 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lim2P56563 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lim2P56563 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lim2P56563 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lim2P56563 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lim2P56563 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lim2P56563 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lim2P56563 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.58□□□□□ -0.56
Lim2P56563 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lim2P56563 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.58□□□□□ -0.56
Lim2P56563 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.58□□□□□ -0.56
Lim2P56563 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lim2P56563 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.58□□□□□ -0.56
Lim2P56563 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lim2P56563 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lim2P56563 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lim2P56563 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.58□□□□□ -0.56
Lim2P56563 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lim2P56563 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Lim2P56563 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lim2P56563 Gm8731-201ENSMUST00000118088 412 ntBASIC11.58□□□□□ -0.56
Lim2P56563 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms