Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC14.64□□□□□ -0.07
Msh6P54276 Gm42779-201ENSMUST00000198807 406 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Gm43002-201ENSMUST00000200310 155 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Gm43671-201ENSMUST00000200422 433 ntBASIC14.64□□□□□ -0.07
Msh6P54276 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Gm5996-201ENSMUST00000211110 718 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Gm5468-202ENSMUST00000227851 682 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Msh6P54276 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Msh6P54276 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Msh6P54276 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Msh6P54276 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Gm44573-201ENSMUST00000191753 2370 ntBASIC14.64□□□□□ -0.07
Msh6P54276 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh6P54276 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Msh6P54276 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.63□□□□□ -0.07
Msh6P54276 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.63□□□□□ -0.07
Msh6P54276 Gm13445-201ENSMUST00000121664 307 ntBASIC14.63□□□□□ -0.07
Msh6P54276 Gm24809-201ENSMUST00000175318 271 ntBASIC14.63□□□□□ -0.07
Msh6P54276 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.63□□□□□ -0.07
Msh6P54276 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC14.63□□□□□ -0.07
Msh6P54276 Gm29164-201ENSMUST00000185454 1024 ntBASIC14.63□□□□□ -0.07
Msh6P54276 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Gm10254-201ENSMUST00000052888 867 ntBASIC14.63□□□□□ -0.07
Msh6P54276 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Msh6P54276 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Gm43102-201ENSMUST00000201004 2324 ntBASIC14.63□□□□□ -0.07
Msh6P54276 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Msh6P54276 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Msh6P54276 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh6P54276 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Gm15329-201ENSMUST00000121408 155 ntBASIC14.62□□□□□ -0.07
Msh6P54276 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.62□□□□□ -0.07
Msh6P54276 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.62□□□□□ -0.07
Msh6P54276 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Gm4895-201ENSMUST00000181646 1137 ntBASIC14.62□□□□□ -0.07
Msh6P54276 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC14.62□□□□□ -0.07
Msh6P54276 Gm42433-201ENSMUST00000196806 940 ntBASIC14.62□□□□□ -0.07
Msh6P54276 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC14.62□□□□□ -0.07
Msh6P54276 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.62□□□□□ -0.07
Msh6P54276 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.62□□□□□ -0.07
Msh6P54276 CT030170.2-201ENSMUST00000223267 126 ntBASIC14.62□□□□□ -0.07
Msh6P54276 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.62□□□□□ -0.07
Msh6P54276 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Msh6P54276 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Msh6P54276 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Msh6P54276 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Msh6P54276 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msh6P54276 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Gm13422-201ENSMUST00000118834 504 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms