Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Gm29615-201ENSMUST00000185371 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm28224-201ENSMUST00000186078 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm29001-201ENSMUST00000186177 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm28292-201ENSMUST00000186593 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm28101-201ENSMUST00000187608 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm29076-201ENSMUST00000187689 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm28302-201ENSMUST00000187931 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm28646-201ENSMUST00000188220 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm28205-201ENSMUST00000189177 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm29032-201ENSMUST00000189797 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm28695-201ENSMUST00000190300 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm37448-201ENSMUST00000192795 697 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Gm8913-201ENSMUST00000209491 641 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Gm17827-201ENSMUST00000211825 742 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Fdft1P53798 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Fdft1P53798 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Fdft1P53798 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Fdft1P53798 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Fdft1P53798 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Fdft1P53798 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Fdft1P53798 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.6□□□□□ -0.55
Fdft1P53798 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Gm13996-201ENSMUST00000118456 430 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Fdft1P53798 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 Gm11660-201ENSMUST00000120955 412 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Fdft1P53798 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Gm26083-201ENSMUST00000157904 193 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Fdft1P53798 Gm5705-201ENSMUST00000066241 711 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Fdft1P53798 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Fdft1P53798 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.6□□□□□ -0.55
Fdft1P53798 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
Fdft1P53798 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fdft1P53798 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Fdft1P53798 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms