Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox3P53784 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.18□□□□□ -0.62
Sox3P53784 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sox3P53784 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.18□□□□□ -0.62
Sox3P53784 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sox3P53784 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sox3P53784 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sox3P53784 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.18□□□□□ -0.62
Sox3P53784 Gm11989-201ENSMUST00000117240 672 ntBASIC11.18□□□□□ -0.62
Sox3P53784 Gm11362-201ENSMUST00000118838 850 ntBASIC11.18□□□□□ -0.62
Sox3P53784 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.18□□□□□ -0.62
Sox3P53784 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.18□□□□□ -0.62
Sox3P53784 Gm42937-201ENSMUST00000197360 752 ntBASIC11.18□□□□□ -0.62
Sox3P53784 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Gm44980-201ENSMUST00000205826 314 ntBASIC11.18□□□□□ -0.62
Sox3P53784 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.18□□□□□ -0.62
Sox3P53784 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sox3P53784 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.18□□□□□ -0.62
Sox3P53784 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sox3P53784 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox3P53784 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox3P53784 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox3P53784 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Gm11956-201ENSMUST00000119525 512 ntBASIC11.17□□□□□ -0.62
Sox3P53784 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Gm14219-201ENSMUST00000120414 288 ntBASIC11.17□□□□□ -0.62
Sox3P53784 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox3P53784 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.17□□□□□ -0.62
Sox3P53784 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Gm44329-201ENSMUST00000197469 112 ntBASIC11.17□□□□□ -0.62
Sox3P53784 Gm43520-201ENSMUST00000197996 164 ntBASIC11.17□□□□□ -0.62
Sox3P53784 Gm2965-201ENSMUST00000198365 343 ntBASIC11.17□□□□□ -0.62
Sox3P53784 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox3P53784 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Sox3P53784 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.17□□□□□ -0.62
Sox3P53784 Gm9996-201ENSMUST00000070359 913 ntBASIC11.17□□□□□ -0.62
Sox3P53784 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox3P53784 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms