Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.61□□□□□ -0.87
Nkx2-1P50220 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx2-1P50220 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.6□□□□□ -0.87
Nkx2-1P50220 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm25261-201ENSMUST00000157416 134 ntBASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm18062-201ENSMUST00000208020 547 ntBASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm18055-201ENSMUST00000208254 547 ntBASIC9.6□□□□□ -0.87
Nkx2-1P50220 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.6□□□□□ -0.87
Nkx2-1P50220 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Mir1247-201ENSMUST00000116706 82 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm11425-201ENSMUST00000119608 498 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm11960-201ENSMUST00000122068 925 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm6222-202ENSMUST00000182143 629 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm28882-201ENSMUST00000185504 314 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm38314-201ENSMUST00000195709 625 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm9396-201ENSMUST00000076703 567 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.59□□□□□ -0.87
Nkx2-1P50220 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms