Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ptx3P48759 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.86□□□□□ -0.67
Ptx3P48759 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ptx3P48759 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Ptx3P48759 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ptx3P48759 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ptx3P48759 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.85□□□□□ -0.67
Ptx3P48759 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.85□□□□□ -0.67
Ptx3P48759 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.85□□□□□ -0.67
Ptx3P48759 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Ptx3P48759 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.85□□□□□ -0.67
Ptx3P48759 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.85□□□□□ -0.67
Ptx3P48759 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Ptx3P48759 Gm43852-201ENSMUST00000202098 917 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 Gm5051-201ENSMUST00000204085 485 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.85□□□□□ -0.67
Ptx3P48759 Gm44506-201ENSMUST00000206278 965 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Gm45550-201ENSMUST00000209380 946 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 Gm7940-201ENSMUST00000218195 769 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.85□□□□□ -0.67
Ptx3P48759 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ptx3P48759 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ptx3P48759 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ptx3P48759 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.84□□□□□ -0.67
Ptx3P48759 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ptx3P48759 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ptx3P48759 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ptx3P48759 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ptx3P48759 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ptx3P48759 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.84□□□□□ -0.67
Ptx3P48759 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.84□□□□□ -0.67
Ptx3P48759 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ptx3P48759 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ptx3P48759 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ptx3P48759 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ptx3P48759 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ptx3P48759 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ptx3P48759 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ptx3P48759 Gm12029-201ENSMUST00000120073 832 ntBASIC10.84□□□□□ -0.67
Ptx3P48759 Gm14585-201ENSMUST00000120713 634 ntBASIC10.84□□□□□ -0.67
Ptx3P48759 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.84□□□□□ -0.67
Ptx3P48759 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ptx3P48759 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ptx3P48759 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ptx3P48759 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.84□□□□□ -0.67
Ptx3P48759 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ptx3P48759 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.84□□□□□ -0.67
Ptx3P48759 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ptx3P48759 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms