Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Prox1P48437 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.15□□□□□ -0.62
Prox1P48437 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.15□□□□□ -0.62
Prox1P48437 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Gm9136-201ENSMUST00000193368 454 ntBASIC11.15□□□□□ -0.62
Prox1P48437 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Gm45880-201ENSMUST00000213041 853 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Gm9996-201ENSMUST00000070359 913 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Prox1P48437 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Prox1P48437 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Prox1P48437 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.15□□□□□ -0.62
Prox1P48437 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
Prox1P48437 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Prox1P48437 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Prox1P48437 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Prox1P48437 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Prox1P48437 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.15□□□□□ -0.63
Prox1P48437 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Prox1P48437 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Prox1P48437 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Prox1P48437 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.15□□□□□ -0.63
Prox1P48437 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.14□□□□□ -0.63
Prox1P48437 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.14□□□□□ -0.63
Prox1P48437 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Prox1P48437 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.14□□□□□ -0.63
Prox1P48437 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.14□□□□□ -0.63
Prox1P48437 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Prox1P48437 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Prox1P48437 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Prox1P48437 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Prox1P48437 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Gm14247-201ENSMUST00000120950 237 ntBASIC11.14□□□□□ -0.63
Prox1P48437 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Prox1P48437 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Gm25043-201ENSMUST00000158604 212 ntBASIC11.14□□□□□ -0.63
Prox1P48437 Gm37008-201ENSMUST00000195712 319 ntBASIC11.14□□□□□ -0.63
Prox1P48437 Gm42627-201ENSMUST00000197347 224 ntBASIC11.14□□□□□ -0.63
Prox1P48437 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Gm18054-201ENSMUST00000207539 555 ntBASIC11.14□□□□□ -0.63
Prox1P48437 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.14□□□□□ -0.63
Prox1P48437 Gm19309-201ENSMUST00000218295 205 ntBASIC11.14□□□□□ -0.63
Prox1P48437 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Gm9257-201ENSMUST00000221254 232 ntBASIC11.14□□□□□ -0.63
Prox1P48437 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.14□□□□□ -0.63
Prox1P48437 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.14□□□□□ -0.63
Prox1P48437 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Prox1P48437 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Prox1P48437 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.14□□□□□ -0.63
Prox1P48437 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms