Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.36□□□□□ -0.59
Gli1P47806 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gli1P47806 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gli1P47806 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.36□□□□□ -0.59
Gli1P47806 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gli1P47806 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.36□□□□□ -0.59
Gli1P47806 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Gm14247-201ENSMUST00000120950 237 ntBASIC11.35□□□□□ -0.59
Gli1P47806 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.35□□□□□ -0.59
Gli1P47806 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Gm9550-201ENSMUST00000161130 862 ntBASIC11.35□□□□□ -0.59
Gli1P47806 Gm5706-201ENSMUST00000181525 993 ntBASIC11.35□□□□□ -0.59
Gli1P47806 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.35□□□□□ -0.59
Gli1P47806 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Gm18730-201ENSMUST00000218038 343 ntBASIC11.35□□□□□ -0.59
Gli1P47806 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Gli1P47806 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gli1P47806 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.35□□□□□ -0.59
Gli1P47806 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.35□□□□□ -0.59
Gli1P47806 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gli1P47806 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.35□□□□□ -0.59
Gli1P47806 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.34□□□□□ -0.59
Gli1P47806 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.34□□□□□ -0.59
Gli1P47806 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.34□□□□□ -0.59
Gli1P47806 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.34□□□□□ -0.59
Gli1P47806 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Gli1P47806 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Gli1P47806 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.34□□□□□ -0.59
Gli1P47806 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Gli1P47806 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Gli1P47806 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Gli1P47806 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Gm24749-201ENSMUST00000157838 343 ntBASIC11.34□□□□□ -0.59
Gli1P47806 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.34□□□□□ -0.59
Gli1P47806 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.34□□□□□ -0.59
Gli1P47806 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.34□□□□□ -0.59
Gli1P47806 Rprl1-202ENSMUST00000198476 238 ntBASIC11.34□□□□□ -0.59
Gli1P47806 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.34□□□□□ -0.59
Gli1P47806 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.34□□□□□ -0.59
Gli1P47806 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.34□□□□□ -0.59
Gli1P47806 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.34□□□□□ -0.59
Gli1P47806 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Gli1P47806 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Gli1P47806 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Gli1P47806 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Gli1P47806 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gli1P47806 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms