Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.4□□□□□ -0.58
Sox18P43680 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.4□□□□□ -0.58
Sox18P43680 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.4□□□□□ -0.58
Sox18P43680 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.4□□□□□ -0.58
Sox18P43680 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox18P43680 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Sox18P43680 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox18P43680 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.4□□□□□ -0.58
Sox18P43680 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox18P43680 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Gm45210-201ENSMUST00000206401 1577 ntBASIC11.4□□□□□ -0.58
Sox18P43680 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox18P43680 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.59
Sox18P43680 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.4□□□□□ -0.59
Sox18P43680 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox18P43680 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox18P43680 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sox18P43680 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox18P43680 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm25766-201ENSMUST00000104101 131 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Gm24231-201ENSMUST00000104315 133 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm9506-201ENSMUST00000118516 320 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Gm11877-201ENSMUST00000118921 852 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Gm14905-201ENSMUST00000122351 639 ntBASIC11.39□□□□□ -0.59
Sox18P43680 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.39□□□□□ -0.59
Sox18P43680 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Gm13147-202ENSMUST00000177526 1173 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm5714-201ENSMUST00000197343 566 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Gm44332-201ENSMUST00000203712 433 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Gm45259-201ENSMUST00000209217 1006 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm45733-201ENSMUST00000212988 437 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 AC116589.9-201ENSMUST00000221462 908 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox18P43680 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.39□□□□□ -0.59
Sox18P43680 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.39□□□□□ -0.59
Sox18P43680 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox18P43680 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox18P43680 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms