Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rps4l-202ENSMUST00000204242 789 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm7399-201ENSMUST00000032395 858 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm22133-201ENSMUST00000102082 109 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm11500-201ENSMUST00000118237 601 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Mir8093-201ENSMUST00000185043 137 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm5982-201ENSMUST00000196234 512 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.17□□□□□ -0.62
Tnfsf4P43488 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfsf4P43488 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.16□□□□□ -0.62
Tnfsf4P43488 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Btrc-209ENSMUST00000224478 2194 ntBASIC11.16□□□□□ -0.62
Tnfsf4P43488 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.16□□□□□ -0.62
Tnfsf4P43488 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms