Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdx2P43241 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Cdx2P43241 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdx2P43241 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cdx2P43241 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdx2P43241 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cdx2P43241 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Cdx2P43241 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Mir453-201ENSMUST00000104732 82 ntBASIC11.02□□□□□ -0.65
Cdx2P43241 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdx2P43241 Gm8111-201ENSMUST00000117659 987 ntBASIC11.02□□□□□ -0.65
Cdx2P43241 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.02□□□□□ -0.65
Cdx2P43241 Gm25830-201ENSMUST00000158923 132 ntBASIC11.02□□□□□ -0.65
Cdx2P43241 Gm17214-201ENSMUST00000164501 541 ntBASIC11.02□□□□□ -0.65
Cdx2P43241 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.02□□□□□ -0.65
Cdx2P43241 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdx2P43241 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.02□□□□□ -0.65
Cdx2P43241 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdx2P43241 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdx2P43241 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx2P43241 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdx2P43241 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdx2P43241 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.01□□□□□ -0.65
Cdx2P43241 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.01□□□□□ -0.65
Cdx2P43241 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.01□□□□□ -0.65
Cdx2P43241 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.01□□□□□ -0.65
Cdx2P43241 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm14071-201ENSMUST00000117817 509 ntBASIC11.01□□□□□ -0.65
Cdx2P43241 Gm15197-201ENSMUST00000120526 478 ntBASIC11.01□□□□□ -0.65
Cdx2P43241 Mir1905-201ENSMUST00000122779 82 ntBASIC11.01□□□□□ -0.65
Cdx2P43241 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm17070-201ENSMUST00000170463 784 ntBASIC11.01□□□□□ -0.65
Cdx2P43241 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm42779-201ENSMUST00000198807 406 ntBASIC11.01□□□□□ -0.65
Cdx2P43241 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.01□□□□□ -0.65
Cdx2P43241 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.01□□□□□ -0.65
Cdx2P43241 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cdx2P43241 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Paupar-201ENSMUST00000194826 3482 ntBASIC11.01□□□□□ -0.65
Cdx2P43241 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdx2P43241 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx2P43241 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms