Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Timp3P39876 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.57□□□□□ -0.88
Timp3P39876 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Timp3P39876 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.57□□□□□ -0.88
Timp3P39876 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Timp3P39876 Gm11663-201ENSMUST00000117888 290 ntBASIC9.57□□□□□ -0.88
Timp3P39876 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC9.57□□□□□ -0.88
Timp3P39876 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.57□□□□□ -0.88
Timp3P39876 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.57□□□□□ -0.88
Timp3P39876 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.57□□□□□ -0.88
Timp3P39876 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Gm7467-201ENSMUST00000185173 652 ntBASIC9.57□□□□□ -0.88
Timp3P39876 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.57□□□□□ -0.88
Timp3P39876 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.57□□□□□ -0.88
Timp3P39876 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.57□□□□□ -0.88
Timp3P39876 Gm29787-201ENSMUST00000222129 849 ntBASIC9.57□□□□□ -0.88
Timp3P39876 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.57□□□□□ -0.88
Timp3P39876 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Timp3P39876 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.57□□□□□ -0.88
Timp3P39876 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.57□□□□□ -0.88
Timp3P39876 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Timp3P39876 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Timp3P39876 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 BC043934-202ENSMUST00000185694 2356 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Timp3P39876 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Timp3P39876 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.56□□□□□ -0.88
Timp3P39876 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Gm11509-201ENSMUST00000117358 325 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Gm15131-201ENSMUST00000119124 595 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Gm5419-201ENSMUST00000119301 527 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Gm15610-201ENSMUST00000120584 195 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.56□□□□□ -0.88
Timp3P39876 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Timp3P39876 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Timp3P39876 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.56□□□□□ -0.88
Timp3P39876 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.56□□□□□ -0.88
Timp3P39876 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Timp3P39876 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Timp3P39876 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms