Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.68□□□□□ -0.54
Fen1P39749 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Fen1P39749 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Fen1P39749 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Fen1P39749 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Fen1P39749 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Fen1P39749 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Fen1P39749 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Fen1P39749 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Fen1P39749 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Fen1P39749 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Fen1P39749 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.67□□□□□ -0.54
Fen1P39749 Gm6023-201ENSMUST00000118217 606 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Gm14723-201ENSMUST00000118686 215 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Gm7722-201ENSMUST00000120646 741 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Fen1P39749 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.67□□□□□ -0.54
Fen1P39749 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Fen1P39749 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Fen1P39749 Gm44364-201ENSMUST00000198368 141 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Gm43002-201ENSMUST00000200310 155 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Fen1P39749 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Fen1P39749 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Gm8420-201ENSMUST00000097103 598 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.67□□□□□ -0.54
Fen1P39749 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Fen1P39749 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fen1P39749 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.67□□□□□ -0.54
Fen1P39749 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fen1P39749 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Fen1P39749 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Fen1P39749 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.66□□□□□ -0.54
Fen1P39749 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.66□□□□□ -0.54
Fen1P39749 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Fen1P39749 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Fen1P39749 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Fen1P39749 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Fen1P39749 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.66□□□□□ -0.54
Fen1P39749 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fen1P39749 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.66□□□□□ -0.54
Fen1P39749 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.66□□□□□ -0.54
Fen1P39749 Gm27516-201ENSMUST00000184237 98 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms