Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh4P39038 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdh4P39038 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh4P39038 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh4P39038 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.15□□□□□ -0.63
Cdh4P39038 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh4P39038 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh4P39038 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh4P39038 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh4P39038 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.14□□□□□ -0.63
Cdh4P39038 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.14□□□□□ -0.63
Cdh4P39038 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdh4P39038 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm11960-201ENSMUST00000122068 925 ntBASIC11.14□□□□□ -0.63
Cdh4P39038 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdh4P39038 Mir6979-201ENSMUST00000183927 56 ntBASIC11.14□□□□□ -0.63
Cdh4P39038 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.14□□□□□ -0.63
Cdh4P39038 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm6867-201ENSMUST00000219165 425 ntBASIC11.14□□□□□ -0.63
Cdh4P39038 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.14□□□□□ -0.63
Cdh4P39038 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.14□□□□□ -0.63
Cdh4P39038 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdh4P39038 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdh4P39038 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdh4P39038 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh4P39038 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdh4P39038 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdh4P39038 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdh4P39038 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.13□□□□□ -0.63
Cdh4P39038 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdh4P39038 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdh4P39038 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdh4P39038 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Gm12165-201ENSMUST00000117047 342 ntBASIC11.13□□□□□ -0.63
Cdh4P39038 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdh4P39038 Gm29499-201ENSMUST00000189151 486 ntBASIC11.13□□□□□ -0.63
Cdh4P39038 Gm28329-201ENSMUST00000191208 689 ntBASIC11.13□□□□□ -0.63
Cdh4P39038 Gm29171-201ENSMUST00000191397 486 ntBASIC11.13□□□□□ -0.63
Cdh4P39038 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdh4P39038 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms