Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfc1P35601 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.23□□□□□ -0.45
Rfc1P35601 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.23□□□□□ -0.45
Rfc1P35601 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rfc1P35601 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rfc1P35601 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfc1P35601 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfc1P35601 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.22□□□□□ -0.45
Rfc1P35601 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Rfc1P35601 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.22□□□□□ -0.45
Rfc1P35601 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rfc1P35601 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rfc1P35601 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rfc1P35601 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rfc1P35601 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.22□□□□□ -0.45
Rfc1P35601 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rfc1P35601 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Gm11425-201ENSMUST00000119608 498 ntBASIC12.22□□□□□ -0.45
Rfc1P35601 Gm12036-201ENSMUST00000120008 530 ntBASIC12.22□□□□□ -0.45
Rfc1P35601 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.22□□□□□ -0.45
Rfc1P35601 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.22□□□□□ -0.45
Rfc1P35601 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Rfc1P35601 Gm5781-201ENSMUST00000219792 443 ntBASIC12.22□□□□□ -0.45
Rfc1P35601 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.22□□□□□ -0.45
Rfc1P35601 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.22□□□□□ -0.45
Rfc1P35601 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Gm9396-201ENSMUST00000076703 567 ntBASIC12.22□□□□□ -0.45
Rfc1P35601 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.22□□□□□ -0.45
Rfc1P35601 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Rfc1P35601 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfc1P35601 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rfc1P35601 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.21□□□□□ -0.45
Rfc1P35601 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rfc1P35601 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rfc1P35601 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.21□□□□□ -0.45
Rfc1P35601 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rfc1P35601 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rfc1P35601 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rfc1P35601 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Gm13736-201ENSMUST00000119272 253 ntBASIC12.21□□□□□ -0.45
Rfc1P35601 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Rfc1P35601 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.21□□□□□ -0.45
Rfc1P35601 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.21□□□□□ -0.45
Rfc1P35601 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rfc1P35601 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rfc1P35601 Gm39404-201ENSMUST00000216350 313 ntBASIC12.21□□□□□ -0.45
Rfc1P35601 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.21□□□□□ -0.45
Rfc1P35601 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfc1P35601 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.21□□□□□ -0.46
Rfc1P35601 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfc1P35601 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rfc1P35601 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rfc1P35601 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfc1P35601 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfc1P35601 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfc1P35601 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfc1P35601 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms