Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm43752-201ENSMUST00000198475 697 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm26047-202ENSMUST00000198840 115 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm12036-201ENSMUST00000120008 530 ntBASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm15329-201ENSMUST00000121408 155 ntBASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm25830-201ENSMUST00000158923 132 ntBASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm16030-201ENSMUST00000159098 603 ntBASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm8197-202ENSMUST00000193422 934 ntBASIC10.72□□□□□ -0.69
Sftpa1P35242 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Sftpa1P35242 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm6855-201ENSMUST00000206307 790 ntBASIC10.72□□□□□ -0.69
Sftpa1P35242 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.72□□□□□ -0.69
Sftpa1P35242 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.72□□□□□ -0.69
Sftpa1P35242 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sftpa1P35242 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sftpa1P35242 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.71□□□□□ -0.69
Sftpa1P35242 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms