Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
VtnP29788 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VtnP29788 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
VtnP29788 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
VtnP29788 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.55□□□□□ -0.72
VtnP29788 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.55□□□□□ -0.72
VtnP29788 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VtnP29788 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.54□□□□□ -0.72
VtnP29788 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
VtnP29788 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.54□□□□□ -0.72
VtnP29788 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
VtnP29788 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.54□□□□□ -0.72
VtnP29788 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VtnP29788 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.54□□□□□ -0.72
VtnP29788 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.54□□□□□ -0.72
VtnP29788 Gm8199-201ENSMUST00000121323 823 ntBASIC10.54□□□□□ -0.72
VtnP29788 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
VtnP29788 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
VtnP29788 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Gm5714-201ENSMUST00000197343 566 ntBASIC10.54□□□□□ -0.72
VtnP29788 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VtnP29788 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Gm7940-201ENSMUST00000218195 769 ntBASIC10.54□□□□□ -0.72
VtnP29788 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.54□□□□□ -0.72
VtnP29788 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.54□□□□□ -0.72
VtnP29788 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.54□□□□□ -0.72
VtnP29788 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
VtnP29788 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.54□□□□□ -0.72
VtnP29788 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
VtnP29788 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
VtnP29788 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VtnP29788 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VtnP29788 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VtnP29788 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.53□□□□□ -0.72
VtnP29788 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.53□□□□□ -0.72
VtnP29788 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
VtnP29788 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
VtnP29788 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VtnP29788 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VtnP29788 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Gm11783-201ENSMUST00000119549 885 ntBASIC10.53□□□□□ -0.72
VtnP29788 Gm11667-201ENSMUST00000119828 486 ntBASIC10.53□□□□□ -0.72
VtnP29788 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.53□□□□□ -0.72
VtnP29788 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
VtnP29788 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.53□□□□□ -0.72
VtnP29788 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Ginm1-202ENSMUST00000065124 300 ntBASIC10.53□□□□□ -0.72
VtnP29788 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VtnP29788 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VtnP29788 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms