Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.66□□□□□ -0.7
Nedd8P29595 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nedd8P29595 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.65□□□□□ -0.7
Nedd8P29595 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nedd8P29595 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nedd8P29595 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nedd8P29595 Rprl1-201ENSMUST00000158050 327 ntBASIC10.65□□□□□ -0.7
Nedd8P29595 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Nedd8P29595 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Gm8810-201ENSMUST00000172895 754 ntBASIC10.65□□□□□ -0.7
Nedd8P29595 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.65□□□□□ -0.7
Nedd8P29595 Gm38241-201ENSMUST00000192641 898 ntBASIC10.65□□□□□ -0.7
Nedd8P29595 Gm38314-201ENSMUST00000195709 625 ntBASIC10.65□□□□□ -0.7
Nedd8P29595 Gm42937-201ENSMUST00000197360 752 ntBASIC10.65□□□□□ -0.7
Nedd8P29595 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nedd8P29595 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.65□□□□□ -0.7
Nedd8P29595 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.65□□□□□ -0.7
Nedd8P29595 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.65□□□□□ -0.7
Nedd8P29595 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Nedd8P29595 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nedd8P29595 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.65□□□□□ -0.71
Nedd8P29595 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nedd8P29595 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nedd8P29595 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nedd8P29595 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nedd8P29595 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.64□□□□□ -0.71
Nedd8P29595 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Nedd8P29595 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.64□□□□□ -0.71
Nedd8P29595 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Gm6114-201ENSMUST00000182472 968 ntBASIC10.64□□□□□ -0.71
Nedd8P29595 Mir8102-201ENSMUST00000184148 139 ntBASIC10.64□□□□□ -0.71
Nedd8P29595 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.64□□□□□ -0.71
Nedd8P29595 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Nedd8P29595 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.64□□□□□ -0.71
Nedd8P29595 Gm45930-201ENSMUST00000221330 292 ntBASIC10.64□□□□□ -0.71
Nedd8P29595 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.64□□□□□ -0.71
Nedd8P29595 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.64□□□□□ -0.71
Nedd8P29595 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nedd8P29595 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nedd8P29595 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms