Protein–RNA interactions for Protein: P28867

Prkcd, Protein kinase C delta type, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcdP28867 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.47□□□□□ -0.57
PrkcdP28867 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
PrkcdP28867 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.47□□□□□ -0.57
PrkcdP28867 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
PrkcdP28867 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.47□□□□□ -0.57
PrkcdP28867 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.47□□□□□ -0.57
PrkcdP28867 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
PrkcdP28867 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.47□□□□□ -0.57
PrkcdP28867 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.47□□□□□ -0.57
PrkcdP28867 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.47□□□□□ -0.57
PrkcdP28867 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.47□□□□□ -0.57
PrkcdP28867 Gm2553-201ENSMUST00000215986 605 ntBASIC11.47□□□□□ -0.57
PrkcdP28867 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
PrkcdP28867 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.47□□□□□ -0.57
PrkcdP28867 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.47□□□□□ -0.57
PrkcdP28867 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.47□□□□□ -0.57
PrkcdP28867 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkcdP28867 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
PrkcdP28867 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.46□□□□□ -0.57
PrkcdP28867 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
PrkcdP28867 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.46□□□□□ -0.57
PrkcdP28867 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
PrkcdP28867 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm26286-201ENSMUST00000104166 134 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
PrkcdP28867 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
PrkcdP28867 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm6963-201ENSMUST00000147879 379 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 Snora78-201ENSMUST00000158630 128 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm3096-201ENSMUST00000185770 364 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm37489-201ENSMUST00000191883 159 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 Gm5982-201ENSMUST00000196234 512 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
PrkcdP28867 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm6450-201ENSMUST00000200896 574 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 Gm43962-201ENSMUST00000203898 190 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
PrkcdP28867 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Gm5705-201ENSMUST00000066241 711 ntBASIC11.46□□□□□ -0.57
PrkcdP28867 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
PrkcdP28867 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkcdP28867 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.46□□□□□ -0.58
PrkcdP28867 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PrkcdP28867 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PrkcdP28867 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkcdP28867 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkcdP28867 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkcdP28867 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PrkcdP28867 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
PrkcdP28867 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkcdP28867 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkcdP28867 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
PrkcdP28867 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkcdP28867 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms