Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Gjb1P28230 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm16219-201ENSMUST00000120096 274 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Gm15197-201ENSMUST00000120526 478 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Gm14165-201ENSMUST00000121456 952 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm16305-201ENSMUST00000140747 556 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm18035-201ENSMUST00000211962 589 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm9487-201ENSMUST00000216600 472 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Gjb1P28230 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Gjb1P28230 Gm5449-201ENSMUST00000081132 357 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Gjb1P28230 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Gjb1P28230 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gjb1P28230 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.93□□□□□ -0.34
Gjb1P28230 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Gjb1P28230 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Gjb1P28230 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gjb1P28230 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gjb1P28230 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.92□□□□□ -0.34
Gjb1P28230 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Gjb1P28230 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Gjb1P28230 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Gm23769-201ENSMUST00000104441 121 ntBASIC12.92□□□□□ -0.34
Gjb1P28230 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gjb1P28230 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.92□□□□□ -0.34
Gjb1P28230 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gjb1P28230 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.92□□□□□ -0.34
Gjb1P28230 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Gm17221-201ENSMUST00000163909 481 ntBASIC12.92□□□□□ -0.34
Gjb1P28230 Gm17073-201ENSMUST00000168069 556 ntBASIC12.92□□□□□ -0.34
Gjb1P28230 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.92□□□□□ -0.34
Gjb1P28230 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.92□□□□□ -0.34
Gjb1P28230 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.92□□□□□ -0.34
Gjb1P28230 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Gjb1P28230 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Gjb1P28230 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.92□□□□□ -0.34
Gjb1P28230 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Gjb1P28230 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Gjb1P28230 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gjb1P28230 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Gjb1P28230 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Gjb1P28230 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gjb1P28230 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gjb1P28230 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.91□□□□□ -0.34
Gjb1P28230 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Gjb1P28230 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.91□□□□□ -0.34
Gjb1P28230 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gjb1P28230 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms