Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.72□□□□□ -0.85
Tnfrsf1aP25118 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tnfrsf1aP25118 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Gm26083-201ENSMUST00000157904 193 ntBASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Gm45224-201ENSMUST00000208203 414 ntBASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tnfrsf1aP25118 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Gm26047-201ENSMUST00000157308 113 ntBASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Gm4857-201ENSMUST00000192718 785 ntBASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Gm26047-202ENSMUST00000198840 115 ntBASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Tnfrsf1aP25118 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms