Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.93□□□□□ -0.66
Clk1P22518 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.93□□□□□ -0.66
Clk1P22518 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Gm5419-201ENSMUST00000119301 527 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Clk1P22518 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.93□□□□□ -0.66
Clk1P22518 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.93□□□□□ -0.66
Clk1P22518 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.93□□□□□ -0.66
Clk1P22518 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.93□□□□□ -0.66
Clk1P22518 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
Clk1P22518 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.93□□□□□ -0.66
Clk1P22518 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Clk1P22518 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.93□□□□□ -0.66
Clk1P22518 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Clk1P22518 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clk1P22518 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.93□□□□□ -0.66
Clk1P22518 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Gm37962-201ENSMUST00000195535 2034 ntBASIC10.92□□□□□ -0.66
Clk1P22518 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.92□□□□□ -0.66
Clk1P22518 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Clk1P22518 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Clk1P22518 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Gm26361-201ENSMUST00000158868 186 ntBASIC10.92□□□□□ -0.66
Clk1P22518 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.92□□□□□ -0.66
Clk1P22518 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.92□□□□□ -0.66
Clk1P22518 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.92□□□□□ -0.66
Clk1P22518 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Clk1P22518 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.92□□□□□ -0.66
Clk1P22518 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Gm45289-201ENSMUST00000211048 2577 ntBASIC10.92□□□□□ -0.66
Clk1P22518 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Clk1P22518 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms