Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.17□□□□□ -0.62
BdnfP21237 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Gm9368-201ENSMUST00000219348 831 ntBASIC11.17□□□□□ -0.62
BdnfP21237 Gm7399-201ENSMUST00000032395 858 ntBASIC11.17□□□□□ -0.62
BdnfP21237 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.17□□□□□ -0.62
BdnfP21237 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.17□□□□□ -0.62
BdnfP21237 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
BdnfP21237 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Gm14644-201ENSMUST00000116671 647 ntBASIC11.16□□□□□ -0.62
BdnfP21237 Gm11989-201ENSMUST00000117240 672 ntBASIC11.16□□□□□ -0.62
BdnfP21237 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Gm11362-201ENSMUST00000118838 850 ntBASIC11.16□□□□□ -0.62
BdnfP21237 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.16□□□□□ -0.62
BdnfP21237 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Gm5070-201ENSMUST00000177599 862 ntBASIC11.16□□□□□ -0.62
BdnfP21237 Gm9192-201ENSMUST00000183221 985 ntBASIC11.16□□□□□ -0.62
BdnfP21237 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
BdnfP21237 Gm3096-201ENSMUST00000185770 364 ntBASIC11.16□□□□□ -0.62
BdnfP21237 Gm31256-201ENSMUST00000194705 506 ntBASIC11.16□□□□□ -0.62
BdnfP21237 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.16□□□□□ -0.62
BdnfP21237 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.16□□□□□ -0.62
BdnfP21237 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
BdnfP21237 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
BdnfP21237 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.15□□□□□ -0.62
BdnfP21237 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.15□□□□□ -0.62
BdnfP21237 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.15□□□□□ -0.62
BdnfP21237 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
BdnfP21237 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms