Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col1a1P11087 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col1a1P11087 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.46□□□□□ -0.26
Col1a1P11087 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col1a1P11087 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col1a1P11087 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Col1a1P11087 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col1a1P11087 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col1a1P11087 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col1a1P11087 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col1a1P11087 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col1a1P11087 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col1a1P11087 Gm24279-201ENSMUST00000104236 131 ntBASIC13.45□□□□□ -0.26
Col1a1P11087 Gm3828-201ENSMUST00000121817 257 ntBASIC13.45□□□□□ -0.26
Col1a1P11087 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Col1a1P11087 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Gm19246-201ENSMUST00000173599 255 ntBASIC13.45□□□□□ -0.26
Col1a1P11087 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.45□□□□□ -0.26
Col1a1P11087 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC13.45□□□□□ -0.26
Col1a1P11087 Gm20781-201ENSMUST00000193154 693 ntBASIC13.45□□□□□ -0.26
Col1a1P11087 Gm21736-201ENSMUST00000195399 693 ntBASIC13.45□□□□□ -0.26
Col1a1P11087 Gm42751-201ENSMUST00000198065 559 ntBASIC13.45□□□□□ -0.26
Col1a1P11087 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.45□□□□□ -0.26
Col1a1P11087 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col1a1P11087 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.45□□□□□ -0.26
Col1a1P11087 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.45□□□□□ -0.26
Col1a1P11087 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col1a1P11087 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.44□□□□□ -0.26
Col1a1P11087 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 AC164556.1-201ENSMUST00000221318 751 ntBASIC13.44□□□□□ -0.26
Col1a1P11087 AC152169.1-201ENSMUST00000223901 701 ntBASIC13.44□□□□□ -0.26
Col1a1P11087 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.44□□□□□ -0.26
Col1a1P11087 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.44□□□□□ -0.26
Col1a1P11087 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Col1a1P11087 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col1a1P11087 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col1a1P11087 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col1a1P11087 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.43□□□□□ -0.26
Col1a1P11087 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col1a1P11087 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC13.43□□□□□ -0.26
Col1a1P11087 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Gm16165-201ENSMUST00000160140 795 ntBASIC13.43□□□□□ -0.26
Col1a1P11087 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.43□□□□□ -0.26
Col1a1P11087 Gm26119-201ENSMUST00000175601 104 ntBASIC13.43□□□□□ -0.26
Col1a1P11087 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC13.43□□□□□ -0.26
Col1a1P11087 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col1a1P11087 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms