Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Mir671-201ENSMUST00000102432 98 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm14993-201ENSMUST00000121180 164 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm13981-201ENSMUST00000122360 447 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm25545-201ENSMUST00000122673 323 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm22846-201ENSMUST00000157706 270 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm20414-201ENSMUST00000172918 646 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm34379-201ENSMUST00000195036 290 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm6855-201ENSMUST00000206307 790 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm18035-201ENSMUST00000211962 589 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm9487-201ENSMUST00000216600 472 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm25580-201ENSMUST00000083409 327 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxc8P09025 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxc8P09025 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hoxc8P09025 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.29□□□□□ -0.44
Hoxc8P09025 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc8P09025 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc8P09025 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc8P09025 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.28□□□□□ -0.44
Hoxc8P09025 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc8P09025 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.28□□□□□ -0.44
Hoxc8P09025 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.28□□□□□ -0.44
Hoxc8P09025 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Gm5700-201ENSMUST00000191483 989 ntBASIC12.28□□□□□ -0.44
Hoxc8P09025 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.28□□□□□ -0.44
Hoxc8P09025 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.28□□□□□ -0.44
Hoxc8P09025 Capsl-202ENSMUST00000226688 739 ntBASIC12.28□□□□□ -0.44
Hoxc8P09025 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc8P09025 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc8P09025 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc8P09025 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc8P09025 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc8P09025 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.28□□□□□ -0.44
Hoxc8P09025 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc8P09025 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc8P09025 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc8P09025 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc8P09025 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.27□□□□□ -0.44
Hoxc8P09025 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms