Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxa4P06798 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxa4P06798 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxa4P06798 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm15615-201ENSMUST00000118876 198 ntBASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm15573-201ENSMUST00000119487 540 ntBASIC11.43□□□□□ -0.58
Hoxa4P06798 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm9550-201ENSMUST00000161130 862 ntBASIC11.43□□□□□ -0.58
Hoxa4P06798 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm7504-201ENSMUST00000201449 424 ntBASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.43□□□□□ -0.58
Hoxa4P06798 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Gm45398-201ENSMUST00000210561 165 ntBASIC11.43□□□□□ -0.58
Hoxa4P06798 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hoxa4P06798 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa4P06798 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm14942-201ENSMUST00000119642 336 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm7467-201ENSMUST00000185173 652 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm43947-201ENSMUST00000203019 959 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm5996-201ENSMUST00000211110 718 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm45856-201ENSMUST00000212752 416 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxa4P06798 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa4P06798 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.42□□□□□ -0.58
Hoxa4P06798 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms