Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
P06344 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.36□□□□□ -0.75
P06344 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P06344 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P06344 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
P06344 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.36□□□□□ -0.75
P06344 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
P06344 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P06344 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.36□□□□□ -0.75
P06344 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.35□□□□□ -0.75
P06344 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.35□□□□□ -0.75
P06344 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P06344 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.35□□□□□ -0.75
P06344 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P06344 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.35□□□□□ -0.75
P06344 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
P06344 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Gm43916-201ENSMUST00000205062 967 ntBASIC10.35□□□□□ -0.75
P06344 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Gm6108-201ENSMUST00000208365 367 ntBASIC10.35□□□□□ -0.75
P06344 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.35□□□□□ -0.75
P06344 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.35□□□□□ -0.75
P06344 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P06344 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P06344 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P06344 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
P06344 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.35□□□□□ -0.75
P06344 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P06344 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
P06344 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P06344 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
P06344 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.34□□□□□ -0.75
P06344 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.34□□□□□ -0.75
P06344 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.34□□□□□ -0.75
P06344 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.34□□□□□ -0.75
P06344 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.34□□□□□ -0.75
P06344 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
P06344 Gm26047-201ENSMUST00000157308 113 ntBASIC10.34□□□□□ -0.75
P06344 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.34□□□□□ -0.75
P06344 Gm3150-201ENSMUST00000166418 204 ntBASIC10.34□□□□□ -0.75
P06344 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.34□□□□□ -0.75
P06344 Gm12407-201ENSMUST00000180219 324 ntBASIC10.34□□□□□ -0.75
P06344 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.34□□□□□ -0.75
P06344 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Gm26047-202ENSMUST00000198840 115 ntBASIC10.34□□□□□ -0.75
P06344 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.34□□□□□ -0.75
P06344 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms