Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Psmc3O88685 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.3□□□□□ -0.44
Psmc3O88685 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Psmc3O88685 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.3□□□□□ -0.44
Psmc3O88685 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Gm28937-201ENSMUST00000185413 695 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Gm29400-201ENSMUST00000187208 695 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Gm28662-201ENSMUST00000188446 695 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Gm28251-201ENSMUST00000188835 695 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Gm37318-201ENSMUST00000194325 695 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Gm38017-201ENSMUST00000194768 695 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Gm37287-201ENSMUST00000195449 695 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Gm37793-201ENSMUST00000195548 695 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.3□□□□□ -0.44
Psmc3O88685 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Psmc3O88685 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Psmc3O88685 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Psmc3O88685 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.3□□□□□ -0.44
Psmc3O88685 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm23272-201ENSMUST00000104053 129 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Psmc3O88685 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Psmc3O88685 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm9089-201ENSMUST00000122027 526 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm8459-201ENSMUST00000162504 760 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 Gm44124-201ENSMUST00000204159 472 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm3619-201ENSMUST00000219947 775 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm5451-201ENSMUST00000080545 579 ntBASIC12.29□□□□□ -0.44
Psmc3O88685 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms