Protein–RNA interactions for Protein: F8VQC1

Srp72, Signal recognition particle subunit SRP72, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp72F8VQC1 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.39□□□□□ -0.59
Srp72F8VQC1 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Srp72F8VQC1 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.38□□□□□ -0.59
Srp72F8VQC1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gm45865-201ENSMUST00000211815 945 ntBASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.38□□□□□ -0.59
Srp72F8VQC1 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.38□□□□□ -0.59
Srp72F8VQC1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.38□□□□□ -0.59
Srp72F8VQC1 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.38□□□□□ -0.59
Srp72F8VQC1 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Srp72F8VQC1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.37□□□□□ -0.59
Srp72F8VQC1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.37□□□□□ -0.59
Srp72F8VQC1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.37□□□□□ -0.59
Srp72F8VQC1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.37□□□□□ -0.59
Srp72F8VQC1 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm11660-201ENSMUST00000120955 412 ntBASIC11.37□□□□□ -0.59
Srp72F8VQC1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm44651-201ENSMUST00000207343 372 ntBASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.37□□□□□ -0.59
Srp72F8VQC1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.37□□□□□ -0.59
Srp72F8VQC1 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Srp72F8VQC1 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.37□□□□□ -0.59
Srp72F8VQC1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms