Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.93□□□□□ -0.5
Atf6F6VAN0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.93□□□□□ -0.5
Atf6F6VAN0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.93□□□□□ -0.5
Atf6F6VAN0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gm5982-201ENSMUST00000196234 512 ntBASIC11.93□□□□□ -0.5
Atf6F6VAN0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gm8420-201ENSMUST00000097103 598 ntBASIC11.93□□□□□ -0.5
Atf6F6VAN0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.93□□□□□ -0.5
Atf6F6VAN0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atf6F6VAN0 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.92□□□□□ -0.5
Atf6F6VAN0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Gm11663-201ENSMUST00000117888 290 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 Mir8093-201ENSMUST00000185043 137 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 Gm4857-201ENSMUST00000192718 785 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Atf6F6VAN0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.92□□□□□ -0.5
Atf6F6VAN0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atf6F6VAN0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.91□□□□□ -0.5
Atf6F6VAN0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Gm12196-201ENSMUST00000120954 262 ntBASIC11.91□□□□□ -0.5
Atf6F6VAN0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Gm2260-201ENSMUST00000184965 657 ntBASIC11.91□□□□□ -0.5
Atf6F6VAN0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms