Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm13623-201ENSMUST00000118359 625 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 Olfr1332-ps1-201ENSMUST00000119243 960 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Mir6354-201ENSMUST00000184979 116 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 Igkv12-42-201ENSMUST00000198769 327 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Rcvrn-201ENSMUST00000021290 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm25232-201ENSMUST00000104502 132 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm15368-201ENSMUST00000120438 858 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm5459-201ENSMUST00000171235 798 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC6.25□□□□□ -1.41
Herc1E9PZP8 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm31579-201ENSMUST00000203306 966 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 Gm6008-201ENSMUST00000206542 874 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 AC126939.2-201ENSMUST00000225989 307 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 AC116390.1-201ENSMUST00000227975 670 ntBASIC6.25□□□□□ -1.41
Herc1E9PZP8 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm13768-201ENSMUST00000116469 929 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm22994-201ENSMUST00000175422 82 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm7047-201ENSMUST00000196224 1063 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm5737-201ENSMUST00000208668 1272 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Ly6g5b-201ENSMUST00000062657 1046 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm13169-201ENSMUST00000122090 1459 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm4257-201ENSMUST00000222877 513 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 AC165260.2-202ENSMUST00000224998 631 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms