Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx6-2D3Z4R4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm27618-201ENSMUST00000183671 60 ntBASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm44069-201ENSMUST00000204898 506 ntBASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm8396-201ENSMUST00000057361 823 ntBASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx6-2D3Z4R4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Nkx6-2D3Z4R4 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm22175-201ENSMUST00000175007 78 ntBASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm21854-201ENSMUST00000179901 471 ntBASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm9522-201ENSMUST00000182394 926 ntBASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm9063-201ENSMUST00000223299 582 ntBASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Chchd1-203ENSMUST00000224633 557 ntBASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nkx6-2D3Z4R4 Gm20445-201ENSMUST00000061905 565 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms