Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Gm22138-201ENSMUST00000158748 128 ntBASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Usf3B2RUQ2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm12628-201ENSMUST00000122193 382 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm42518-201ENSMUST00000196277 938 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm37105-201ENSMUST00000192251 2085 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm43677-201ENSMUST00000198098 2378 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm22133-201ENSMUST00000102082 109 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm7541-201ENSMUST00000118361 535 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm7722-201ENSMUST00000120646 741 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Erich3-203ENSMUST00000189969 3460 ntBASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usf3B2RUQ2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Gm25072-201ENSMUST00000175233 235 ntBASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Gm35960-201ENSMUST00000202712 767 ntBASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Ginm1-202ENSMUST00000065124 300 ntBASIC9.71□□□□□ -0.85
Usf3B2RUQ2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Usf3B2RUQ2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms