Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm13392-201ENSMUST00000117708 150 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm11660-201ENSMUST00000120955 412 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm32999-201ENSMUST00000192693 562 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm18165-201ENSMUST00000217426 928 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm7399-201ENSMUST00000032395 858 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm8420-201ENSMUST00000097103 598 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gm9192-201ENSMUST00000183221 985 ntBASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Rprl1-202ENSMUST00000198476 238 ntBASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gm44651-201ENSMUST00000207343 372 ntBASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gm5455-201ENSMUST00000058710 715 ntBASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.47□□□□□ -0.73
H2afb3S4R1G7 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb3S4R1G7 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms