Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Rgr-203ENSMUST00000225070 4704 ntBASIC12.86□□□□□ -0.35
Prpf40aQ9R1C7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Gm11439-201ENSMUST00000118598 409 ntBASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Gm14277-201ENSMUST00000121195 360 ntBASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Gm6114-201ENSMUST00000182472 968 ntBASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Gm7003-201ENSMUST00000195089 312 ntBASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf40aQ9R1C7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Gm12266-201ENSMUST00000120311 962 ntBASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf40aQ9R1C7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Prpf40aQ9R1C7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Prpf40aQ9R1C7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.83□□□□□ -0.35
Prpf40aQ9R1C7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Prpf40aQ9R1C7 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Prpf40aQ9R1C7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms