Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.38□□□□□ -0.75
Nubp2Q9R061 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.38□□□□□ -0.75
Nubp2Q9R061 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.38□□□□□ -0.75
Nubp2Q9R061 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm23912-201ENSMUST00000104687 87 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm17040-202ENSMUST00000170597 889 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm28071-201ENSMUST00000190355 478 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm37666-201ENSMUST00000194110 866 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm7003-201ENSMUST00000195089 312 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.37□□□□□ -0.75
Nubp2Q9R061 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.37□□□□□ -0.75
Nubp2Q9R061 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.36□□□□□ -0.75
Nubp2Q9R061 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.36□□□□□ -0.75
Nubp2Q9R061 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.36□□□□□ -0.75
Nubp2Q9R061 Gm23949-201ENSMUST00000104027 127 ntBASIC10.36□□□□□ -0.75
Nubp2Q9R061 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nubp2Q9R061 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms